Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SAMN05421512_104315 | Not Available | Positive | 1882326 - 1884539 | 82448.8 |
| hypothetical protein | SAMN05421512_104316 | Not Available | Positive | 1884590 - 1885183 | 21743.0 |
| pyridoxine 5'-phosphate synthase | SAMN05421512_104317 | Not Available | Positive | 1885302 - 1886051 | 26904.1 |
| signal peptidase i | SAMN05421512_104318 | Not Available | Positive | 1886274 - 1887026 | 28317.8 |
| rnase iii | SAMN05421512_104319 | Not Available | Positive | 1887051 - 1887767 | 26003.0 |
| gtp-binding protein era | SAMN05421512_104320 | Not Available | Positive | 1887764 - 1888717 | 35217.6 |
| dna replication and repair protein reco | SAMN05421512_104321 | Not Available | Positive | 1889480 - 1890262 | 28588.7 |
| dna topoisomerase iv subunit a | SAMN05421512_104322 | Not Available | Positive | 1890326 - 1892575 | 83294.4 |
| acyl-coa thioester hydrolase | SAMN05421512_104323 | Not Available | Positive | 1892597 - 1893034 | 16314.3 |
| ssra-binding protein | SAMN05421512_104324 | Not Available | Negative | 1893122 - 1893601 | 18419.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
