Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | SAMN05421512_104305 | Not Available | Positive | 1872272 - 1873306 | 37570.0 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05421512_104306 | Not Available | Negative | 1873328 - 1874722 | 49006.1 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_104307 | Not Available | Positive | 1874824 - 1875444 | 22072.8 |
| threonine dehydratase | SAMN05421512_104308 | Not Available | Positive | 1875487 - 1876710 | 42853.2 |
| uncharacterized membrane protein yckc, rdd family | SAMN05421512_104309 | Not Available | Positive | 1876798 - 1877292 | 17660.2 |
| di- and tricarboxylate transporter | SAMN05421512_104310 | Not Available | Positive | 1877453 - 1879288 | 64772.2 |
| arginine-trna-protein transferase | SAMN05421512_104311 | Not Available | Positive | 1879314 - 1880084 | 29236.7 |
| uracil-dna glycosylase, family 4 | SAMN05421512_104312 | Not Available | Negative | 1880095 - 1880751 | 23806.5 |
| uncharacterized conserved protein, laba/duf88 family | SAMN05421512_104313 | Not Available | Negative | 1880759 - 1881349 | 22641.9 |
| dna-directed rna polymerase subunit omega | SAMN05421512_104314 | Not Available | Positive | 1881804 - 1882211 | 15029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
