Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN05421512_104295 | Not Available | Negative | 1862400 - 1863524 | 39471.9 |
| transcriptional repressor nrdr | SAMN05421512_104296 | Not Available | Negative | 1863544 - 1864020 | 18003.5 |
| serine hydroxymethyltransferase | SAMN05421512_104297 | Not Available | Negative | 1864107 - 1865423 | 47042.2 |
| hypothetical protein | SAMN05421512_104298 | Not Available | Negative | 1865605 - 1865808 | 7429.1 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05421512_104299 | Not Available | Negative | 1865906 - 1867225 | 49211.5 |
| transcriptional regulator, marr family | SAMN05421512_104300 | Not Available | Negative | 1867527 - 1868039 | 19635.7 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05421512_104301 | Not Available | Negative | 1868305 - 1869201 | 30157.2 |
| hypothetical protein | SAMN05421512_104302 | Not Available | Negative | 1869325 - 1869735 | 16087.0 |
| 3-hydroxyisobutyryl-coa hydrolase | SAMN05421512_104303 | Not Available | Negative | 1869788 - 1870849 | 38108.6 |
| hypothetical protein | SAMN05421512_104304 | Not Available | Negative | 1870934 - 1872073 | 41244.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
