Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | SAMN05421512_104285 | Not Available | Negative | 1853467 - 1853787 | 11549.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN05421512_104286 | Not Available | Negative | 1853959 - 1854936 | 34649.1 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN05421512_104287 | Not Available | Negative | 1854933 - 1856024 | 39195.4 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN05421512_104288 | Not Available | Negative | 1856313 - 1856870 | 20378.0 |
| cytochrome b pre-mrna-processing protein 3 | SAMN05421512_104289 | Not Available | Negative | 1856895 - 1857434 | 19712.6 |
| beta-barrel assembly machine subunit bame | SAMN05421512_104290 | Not Available | Positive | 1857576 - 1858013 | 16102.2 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN05421512_104291 | Not Available | Negative | 1858163 - 1860298 | 72775.5 |
| nusb antitermination factor | SAMN05421512_104292 | Not Available | Negative | 1860616 - 1861143 | 19612.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05421512_104293 | Not Available | Negative | 1861146 - 1861592 | 15429.6 |
| riboflavin synthase alpha chain | SAMN05421512_104294 | Not Available | Negative | 1861796 - 1862398 | 21634.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
