Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical chaperone protein | SAMN05421512_10128 | Not Available | Negative | 22082 - 23350 | 45670.2 |
| trna 2-thiocytidine biosynthesis protein ttca | SAMN05421512_10129 | Not Available | Negative | 23453 - 24385 | 34204.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_10130 | Not Available | Negative | 24497 - 26305 | 66689.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421512_10131 | Not Available | Negative | 26490 - 27461 | 34176.3 |
| ssu ribosomal protein s4p | SAMN05421512_10132 | Not Available | Negative | 27627 - 28244 | 23636.5 |
| glutamate racemase | SAMN05421512_10133 | Not Available | Negative | 28440 - 29261 | 28325.5 |
| trna/rrna methyltransferase | SAMN05421512_10134 | Not Available | Negative | 29317 - 30102 | 28550.0 |
| uncharacterized membrane protein hded, duf308 family | SAMN05421512_10135 | Not Available | Positive | 30345 - 30914 | 19599.8 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421512_10136 | Not Available | Negative | 30985 - 32409 | 52497.2 |
| hypothetical protein | SAMN05421512_10137 | Not Available | Negative | 32514 - 33059 | 19853.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
