Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05421512_104255 | Not Available | Negative | 1825309 - 1826130 | 31678.1 |
| ornithine--oxo-acid transaminase | SAMN05421512_104256 | Not Available | Negative | 1826341 - 1827552 | 43463.1 |
| arginase | SAMN05421512_104257 | Not Available | Negative | 1827582 - 1828535 | 34058.9 |
| dna-binding transcriptional regulator, lrp family | SAMN05421512_104258 | Not Available | Positive | 1828724 - 1829146 | 15550.9 |
| hypothetical protein | SAMN05421512_104259 | Not Available | Positive | 1829766 - 1830311 | 20472.7 |
| small subunit ribosomal protein s9 | SAMN05421512_104260 | Not Available | Negative | 1830396 - 1830872 | 17498.2 |
| lsu ribosomal protein l13p | SAMN05421512_104261 | Not Available | Negative | 1830876 - 1831343 | 17247.9 |
| uncharacterized domain 1-containing protein | SAMN05421512_104262 | Not Available | Negative | 1831572 - 1831997 | 14928.4 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421512_104263 | Not Available | Positive | 1832144 - 1832974 | 29792.8 |
| hypothetical protein | SAMN05421512_104264 | Not Available | Positive | 1832967 - 1833512 | 19805.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
