Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_104235 | Not Available | Negative | 1802093 - 1802419 | 10826.8 |
| hypothetical protein | SAMN05421512_104236 | Not Available | Positive | 1802533 - 1803462 | 31616.1 |
| peptidyl-dipeptidase dcp | SAMN05421512_104237 | Not Available | Positive | 1803583 - 1805640 | 76638.4 |
| carbonic anhydrase | SAMN05421512_104238 | Not Available | Negative | 1805709 - 1806434 | 24418.3 |
| atp-dependent rna helicase dead | SAMN05421512_104239 | Not Available | Negative | 1806803 - 1808620 | 65866.4 |
| sarcosine oxidase subunit gamma | SAMN05421512_104240 | Not Available | Negative | 1808988 - 1809563 | 19906.6 |
| sarcosine oxidase subunit alpha | SAMN05421512_104241 | Not Available | Negative | 1809556 - 1812576 | 107524.0 |
| sarcosine oxidase subunit delta | SAMN05421512_104242 | Not Available | Negative | 1812573 - 1812878 | 11485.7 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05421512_104243 | Not Available | Negative | 1812888 - 1813244 | 13026.5 |
| sarcosine oxidase subunit beta | SAMN05421512_104244 | Not Available | Negative | 1813253 - 1814506 | 45573.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
