Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05421512_104215 | Not Available | Negative | 1780118 - 1781059 | 34095.9 |
| nadph2:quinone reductase | SAMN05421512_104216 | Not Available | Negative | 1781069 - 1782046 | 34790.6 |
| phosphatidylcholine synthase | SAMN05421512_104217 | Not Available | Negative | 1782178 - 1782903 | 26098.4 |
| predicted metal-binding membrane protein | SAMN05421512_104218 | Not Available | Negative | 1783062 - 1784042 | 34276.2 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN05421512_104219 | Not Available | Positive | 1784222 - 1785457 | 44325.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421512_104220 | Not Available | Negative | 1785476 - 1786558 | 37764.7 |
| hypothetical protein | SAMN05421512_104221 | Not Available | Negative | 1786627 - 1787580 | 33620.4 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05421512_104222 | Not Available | Positive | 1787735 - 1788652 | 34483.6 |
| beta-methylmalyl-coa/l-malyl-coa lyase | SAMN05421512_104223 | Not Available | Positive | 1788813 - 1789856 | 37548.5 |
| heat shock protein hspq | SAMN05421512_104224 | Not Available | Positive | 1790001 - 1790324 | 12665.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
