Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, nitrogen regulation response regulator ntrx | SAMN05421512_104135 | Not Available | Positive | 1697711 - 1699078 | 50122.3 |
| trk system potassium uptake protein trka | SAMN05421512_104136 | Not Available | Positive | 1699136 - 1700512 | 50124.7 |
| d-alanine transaminase | SAMN05421512_104137 | Not Available | Positive | 1700556 - 1701419 | 31824.4 |
| rna-binding protein hfq | SAMN05421512_104138 | Not Available | Positive | 1701628 - 1701882 | 9510.48 |
| gtp-binding protein hflx | SAMN05421512_104139 | Not Available | Positive | 1701883 - 1703286 | 51502.4 |
| atp diphosphatase | SAMN05421512_104140 | Not Available | Negative | 1703304 - 1704155 | 31609.2 |
| ribosome-associated protein | SAMN05421512_104141 | Not Available | Positive | 1704242 - 1704679 | 15945.3 |
| transcriptional regulator, xre family | SAMN05421512_104142 | Not Available | Negative | 1704680 - 1705510 | 29475.6 |
| hypothetical protein | SAMN05421512_104143 | Not Available | Positive | 1705642 - 1706049 | 13599.3 |
| xylulokinase | SAMN05421512_104144 | Not Available | Positive | 1706192 - 1707655 | 51176.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
