Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase | SAMN05421512_104125 | Not Available | Positive | 1687263 - 1687697 | 15685.7 |
| lipoic acid synthetase | SAMN05421512_104126 | Not Available | Positive | 1687752 - 1688735 | 35950.9 |
| coenzyme q-binding protein coq10 | SAMN05421512_104127 | Not Available | Positive | 1688797 - 1689255 | 17283.6 |
| hypothetical protein | SAMN05421512_104128 | Not Available | Negative | 1689258 - 1689710 | 16761.9 |
| nicotinamide-nucleotide amidase | SAMN05421512_104129 | Not Available | Negative | 1689793 - 1690317 | 17528.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05421512_104130 | Not Available | Negative | 1690314 - 1691579 | 44586.1 |
| pp_01502 | SAMN05421512_104131 | Not Available | Positive | 1691725 - 1692759 | Not Available |
| pas/pac sensor signal transduction histidine kinase | SAMN05421512_104132 | Not Available | Positive | 1692756 - 1693871 | 40237.8 |
| nitrogen metabolism transcriptional regulator, ntrc, fis family | SAMN05421512_104133 | Not Available | Positive | 1693889 - 1695325 | 53551.6 |
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase ntry | SAMN05421512_104134 | Not Available | Positive | 1695502 - 1697721 | 80357.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
