Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | SAMN05421512_104115 | Not Available | Negative | 1674426 - 1676534 | 76379.4 |
| antitoxin cptb | SAMN05421512_104116 | Not Available | Positive | 1676733 - 1677029 | 11142.1 |
| transcription-repair coupling factor | SAMN05421512_104117 | Not Available | Positive | 1677078 - 1680578 | 126352.0 |
| cell division protein ftsb | SAMN05421512_104118 | Not Available | Positive | 1680666 - 1681004 | 12839.7 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05421512_104119 | Not Available | Positive | 1681200 - 1682252 | 38310.7 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN05421512_104120 | Not Available | Positive | 1682268 - 1683662 | 49196.1 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421512_104121 | Not Available | Positive | 1683678 - 1685072 | 47996.4 |
| dihydrolipoamide dehydrogenase | SAMN05421512_104122 | Not Available | Positive | 1685179 - 1686627 | 51246.7 |
| transglycosylase associated protein | SAMN05421512_104123 | Not Available | Positive | 1686721 - 1686969 | 8367.8 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05421512_104124 | Not Available | Positive | 1687027 - 1687266 | 8342.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
