Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05421512_10495 | Not Available | Positive | 1655145 - 1655582 | 15654.9 |
| hypothetical protein | SAMN05421512_10496 | Not Available | Negative | 1655666 - 1656754 | 37203.3 |
| transcriptional regulator, arsr family | SAMN05421512_10497 | Not Available | Negative | 1656842 - 1657174 | 12454.2 |
| hypothetical protein | SAMN05421512_10498 | Not Available | Negative | 1657275 - 1657676 | 15112.3 |
| cytochrome c-type biogenesis protein | SAMN05421512_10499 | Not Available | Positive | 1657885 - 1658625 | 26409.2 |
| monoheme cytochrome soxx (sulfur oxidation) | SAMN05421512_104100 | Not Available | Positive | 1658812 - 1659267 | 16243.6 |
| sulfur-oxidizing protein soxy | SAMN05421512_104101 | Not Available | Positive | 1659325 - 1659777 | 15098.2 |
| sulfur compound chelating protein soxz | SAMN05421512_104102 | Not Available | Positive | 1659830 - 1660156 | 12010.2 |
| sulfur-oxidizing protein soxa | SAMN05421512_104103 | Not Available | Positive | 1660242 - 1661096 | 30984.6 |
| sulfate thiol esterase soxb | SAMN05421512_104104 | Not Available | Positive | 1661240 - 1662934 | 61740.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
