Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triosephosphate isomerase | SAMN05421512_10485 | Not Available | Positive | 1641623 - 1642381 | 25141.8 |
| preprotein translocase subunit secg | SAMN05421512_10486 | Not Available | Positive | 1642515 - 1642883 | 12042.8 |
| ctp synthase | SAMN05421512_10487 | Not Available | Positive | 1643004 - 1644632 | 59729.5 |
| glyoxalase-like domain-containing protein | SAMN05421512_10488 | Not Available | Positive | 1644695 - 1645561 | 31606.4 |
| membrane fusion protein, multidrug efflux system | SAMN05421512_10489 | Not Available | Positive | 1645686 - 1646831 | 40155.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421512_10490 | Not Available | Positive | 1646837 - 1649986 | 111763.0 |
| Trna-lys | Not Available | Not Available | Positive | 1650071 - 1650146 | Not Available |
| hypothetical protein | SAMN05421512_10492 | Not Available | Positive | 1650512 - 1650802 | 10757.6 |
| hypothetical protein | SAMN05421512_10493 | Not Available | Positive | 1651229 - 1652197 | 34744.0 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421512_10494 | Not Available | Positive | 1652308 - 1655148 | 101354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
