Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | SAMN05421512_10475 | Not Available | Positive | 1627621 - 1628817 | 43331.6 |
| citrate synthase | SAMN05421512_10476 | Not Available | Negative | 1629240 - 1630532 | 48243.8 |
| glutamyl-trna synthetase | SAMN05421512_10477 | Not Available | Negative | 1630783 - 1632213 | 52541.4 |
| competence protein comec | SAMN05421512_10478 | Not Available | Positive | 1632375 - 1634921 | 87916.7 |
| repressor lexa | SAMN05421512_10479 | Not Available | Negative | 1634955 - 1635671 | 25816.2 |
| molybdopterin molybdotransferase | SAMN05421512_10480 | Not Available | Negative | 1635848 - 1637062 | 42444.2 |
| cyclic pyranopterin monophosphate synthase subunit moac | SAMN05421512_10481 | Not Available | Negative | 1637095 - 1637616 | 17900.7 |
| indole-3-glycerol phosphate synthase | SAMN05421512_10482 | Not Available | Negative | 1637620 - 1638429 | 28711.4 |
| anthranilate phosphoribosyltransferase | SAMN05421512_10483 | Not Available | Negative | 1638422 - 1639450 | 34838.7 |
| peptidyl-prolyl cis-trans isomerase d | SAMN05421512_10484 | Not Available | Negative | 1639485 - 1641374 | 67722.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
