Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_1018 | Not Available | Positive | 6845 - 7297 | 17100.3 |
| hypothetical protein | SAMN05421512_1019 | Not Available | Positive | 7294 - 7854 | 20451.5 |
| sec-c motif-containing protein | SAMN05421512_10110 | Not Available | Negative | 8024 - 9625 | 59997.4 |
| hypothetical protein | SAMN05421512_10111 | Not Available | Positive | 10025 - 10702 | 25001.9 |
| hypothetical protein | SAMN05421512_10112 | Not Available | Negative | 10733 - 10948 | 7550.85 |
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN05421512_10113 | Not Available | Negative | 11156 - 11926 | 26694.2 |
| hypothetical protein | SAMN05421512_10114 | Not Available | Negative | 12070 - 12393 | 12412.3 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05421512_10115 | Not Available | Positive | 12835 - 13599 | 29121.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_10116 | Not Available | Negative | 13714 - 14478 | 25678.9 |
| phosphoribosylformylglycinamidine synthase | SAMN05421512_10117 | Not Available | Positive | 14732 - 14971 | 8291.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
