Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | SAMN05421512_10465 | Not Available | Positive | 1617009 - 1617572 | 20786.1 |
| undecaprenyl pyrophosphate synthetase | SAMN05421512_10466 | Not Available | Positive | 1617614 - 1618384 | 28337.7 |
| phosphatidate cytidylyltransferase | SAMN05421512_10467 | Not Available | Positive | 1618381 - 1619244 | 29307.8 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05421512_10468 | Not Available | Positive | 1619270 - 1620490 | 42107.6 |
| regulator of sigma e protease | SAMN05421512_10469 | Not Available | Positive | 1620551 - 1621687 | 40666.5 |
| beta-barrel assembly machine subunit bama | SAMN05421512_10470 | Not Available | Positive | 1621879 - 1624239 | 88090.3 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN05421512_10471 | Not Available | Positive | 1624310 - 1625368 | 36180.5 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05421512_10472 | Not Available | Positive | 1625411 - 1625875 | 17251.2 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05421512_10473 | Not Available | Positive | 1625883 - 1626692 | 28296.9 |
| hypothetical protein | SAMN05421512_10474 | Not Available | Positive | 1626689 - 1627624 | 32389.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
