Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valyl-trna synthetase | SAMN05421512_10445 | Not Available | Positive | 1590147 - 1592990 | 106268.0 |
| hypothetical protein | SAMN05421512_10446 | Not Available | Positive | 1593019 - 1593552 | 18918.7 |
| hypothetical protein | SAMN05421512_10447 | Not Available | Negative | 1593584 - 1594663 | 38611.8 |
| hypothetical protein | SAMN05421512_10448 | Not Available | Negative | 1594750 - 1595646 | 32755.8 |
| protein translocase subunit yajc | SAMN05421512_10449 | Not Available | Positive | 1595902 - 1596237 | 12164.1 |
| preprotein translocase subunit secd/secd/secf fusion protein | SAMN05421512_10450 | Not Available | Positive | 1596315 - 1597925 | 58022.6 |
| protein translocase subunit secf | SAMN05421512_10451 | Not Available | Positive | 1597943 - 1598917 | 35179.1 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN05421512_10452 | Not Available | Positive | 1598941 - 1599339 | 13958.9 |
| phytoene synthase | SAMN05421512_10453 | Not Available | Positive | 1599422 - 1600300 | 32122.6 |
| mscs family membrane protein | SAMN05421512_10454 | Not Available | Positive | 1600383 - 1602347 | 71694.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
