Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05421512_10415 | Not Available | Positive | 1562026 - 1562787 | 27500.7 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05421512_10416 | Not Available | Positive | 1562834 - 1563556 | 26094.4 |
| lysm domain-containing protein | SAMN05421512_10417 | Not Available | Positive | 1563716 - 1565032 | 44889.7 |
| hypothetical protein | SAMN05421512_10418 | Not Available | Negative | 1564864 - 1565208 | 12715.4 |
| Trna-asp | Not Available | Not Available | Positive | 1565248 - 1565324 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1565369 - 1565445 | Not Available |
| beta-lactamase class d | SAMN05421512_10421 | Not Available | Positive | 1565669 - 1566535 | 31061.9 |
| nadh dehydrogenase subunit a | SAMN05421512_10422 | Not Available | Positive | 1566771 - 1567136 | 13947.2 |
| nadh dehydrogenase subunit b | SAMN05421512_10423 | Not Available | Positive | 1567127 - 1567705 | 21069.7 |
| nadh dehydrogenase subunit c | SAMN05421512_10424 | Not Available | Positive | 1567771 - 1568376 | 23405.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
