Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05421512_103410 | Not Available | Positive | 1507871 - 1508791 | 32461.0 |
| hypothetical protein | SAMN05421512_103411 | Not Available | Positive | 1508877 - 1509050 | 6152.91 |
| putative endonuclease | SAMN05421512_103412 | Not Available | Positive | 1509047 - 1509445 | 14375.5 |
| glutathione synthase | SAMN05421512_103413 | Not Available | Positive | 1509597 - 1510583 | 35953.1 |
| hypothetical protein | SAMN05421512_103414 | Not Available | Negative | 1510626 - 1512227 | 56068.4 |
| maleylacetoacetate isomerase | SAMN05421512_103415 | Not Available | Negative | 1512325 - 1512972 | 23254.0 |
| glutamate synthase (nadph) small subunit | SAMN05421512_103416 | Not Available | Positive | 1513311 - 1514666 | 47486.7 |
| dihydroorotate oxidase b, catalytic subunit /dihydrouracil dehydrogenase (nad+) /dihydropyrimidine dehydrogenase (nadp+) | SAMN05421512_103417 | Not Available | Positive | 1514729 - 1516039 | 47775.9 |
| eama-like transporter family protein | SAMN05421512_103418 | Not Available | Positive | 1516065 - 1516994 | 32823.9 |
| lytic murein transglycosylase | SAMN05421512_103419 | Not Available | Negative | 1517016 - 1517831 | 29864.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
