Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1330 family | SAMN05421512_103400 | Not Available | Positive | 1496274 - 1496576 | 11198.1 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421512_103401 | Not Available | Positive | 1496573 - 1497052 | 17069.5 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN05421512_103402 | Not Available | Negative | 1497084 - 1498010 | 34884.1 |
| signal transduction histidine kinase | SAMN05421512_103403 | Not Available | Negative | 1498257 - 1500602 | 82396.4 |
| luciferase family oxidoreductase, group 1 | SAMN05421512_103404 | Not Available | Negative | 1500713 - 1501711 | 34995.8 |
| magnesium chelatase family protein | SAMN05421512_103405 | Not Available | Negative | 1501789 - 1503315 | 53270.5 |
| cysteine synthase | SAMN05421512_103406 | Not Available | Negative | 1503504 - 1504466 | 33730.0 |
| dutp pyrophosphatase | SAMN05421512_103407 | Not Available | Negative | 1504639 - 1505088 | 15804.1 |
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN05421512_103408 | Not Available | Negative | 1505175 - 1506401 | 42618.4 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_103409 | Not Available | Negative | 1506449 - 1507657 | 40944.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
