Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN05421512_103380 | Not Available | Negative | 1471254 - 1472132 | 31670.8 |
| p-hydroxybenzoate 3-monooxygenase | SAMN05421512_103381 | Not Available | Positive | 1472238 - 1473452 | 44418.0 |
| polyphosphate kinase 2, pa0141 family | SAMN05421512_103382 | Not Available | Positive | 1473596 - 1474756 | 43808.8 |
| cytosine deaminase | SAMN05421512_103383 | Not Available | Positive | 1474883 - 1476172 | 46978.9 |
| cytochrome p450 | SAMN05421512_103384 | Not Available | Positive | 1476383 - 1477897 | 55370.6 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05421512_103385 | Not Available | Positive | 1477911 - 1478900 | 36849.8 |
| trap transporter, dctm subunit | SAMN05421512_103386 | Not Available | Negative | 1478920 - 1480242 | 46011.0 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_103387 | Not Available | Negative | 1480249 - 1480773 | 18764.2 |
| arylsulfatase a | SAMN05421512_103388 | Not Available | Positive | 1481075 - 1482826 | 64420.4 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN05421512_103389 | Not Available | Negative | 1482814 - 1484001 | 40728.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
