Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_103370 | Not Available | Positive | 1459550 - 1461607 | 74392.7 |
| hypothetical protein | SAMN05421512_103371 | Not Available | Negative | 1461615 - 1462694 | 37880.8 |
| sulfate permease, sulp family | SAMN05421512_103372 | Not Available | Negative | 1462703 - 1464487 | 62078.7 |
| tigr01244 family protein | SAMN05421512_103373 | Not Available | Negative | 1464633 - 1465073 | 15216.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421512_103374 | Not Available | Negative | 1465085 - 1465978 | 33029.0 |
| hypothetical protein | SAMN05421512_103375 | Not Available | Negative | 1466032 - 1466469 | 14914.7 |
| hypothetical protein | SAMN05421512_103376 | Not Available | Negative | 1466473 - 1466916 | 14621.4 |
| transcriptional regulator, arsr family | SAMN05421512_103377 | Not Available | Positive | 1467032 - 1467394 | 12989.7 |
| undecaprenyl-diphosphatase | SAMN05421512_103378 | Not Available | Negative | 1467349 - 1469472 | 75733.7 |
| polyphosphate:amp phosphotransferase | SAMN05421512_103379 | Not Available | Positive | 1469778 - 1471244 | 56285.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
