Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421512_103350 | Not Available | Positive | 1439245 - 1440294 | 38906.0 |
| glutamine synthetase | SAMN05421512_103351 | Not Available | Positive | 1440389 - 1441756 | 51376.9 |
| acyl-coa reductase | SAMN05421512_103352 | Not Available | Positive | 1441853 - 1443241 | 49640.4 |
| alcohol dehydrogenase, class iv | SAMN05421512_103353 | Not Available | Positive | 1443293 - 1444456 | 40729.2 |
| tryptophan synthase, alpha chain | SAMN05421512_103354 | Not Available | Positive | 1444641 - 1445471 | 29057.9 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN05421512_103355 | Not Available | Positive | 1445527 - 1446510 | 35726.2 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05421512_103356 | Not Available | Positive | 1446632 - 1447942 | 46397.2 |
| pantothenate kinase | SAMN05421512_103357 | Not Available | Negative | 1447953 - 1448927 | 36930.3 |
| phosphoribosyl-atp pyrophosphatase | SAMN05421512_103358 | Not Available | Negative | 1449027 - 1449350 | 11549.8 |
| imidazole glycerol phosphate synthase subunit hisf | SAMN05421512_103359 | Not Available | Negative | 1449403 - 1450182 | 27469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
