Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted lipid-binding transport protein, tim44 family | SAMN05421512_103330 | Not Available | Positive | 1417939 - 1418652 | 25613.0 |
| membrane-bound lytic murein transglycosylase a | SAMN05421512_103331 | Not Available | Positive | 1418672 - 1419817 | 40575.8 |
| dna-nicking endonuclease, smr domain | SAMN05421512_103332 | Not Available | Positive | 1419814 - 1420401 | 20745.9 |
| transcriptional regulator, contains xre-family hth domain | SAMN05421512_103333 | Not Available | Positive | 1420398 - 1420769 | 13622.5 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN05421512_103334 | Not Available | Positive | 1420931 - 1423762 | 105991.0 |
| putative peptidoglycan lipid ii flippase | SAMN05421512_103335 | Not Available | Positive | 1423828 - 1425450 | 56358.3 |
| nucleoside-binding protein | SAMN05421512_103336 | Not Available | Positive | 1425720 - 1426724 | 36170.1 |
| nucleoside abc transporter atp-binding protein | SAMN05421512_103337 | Not Available | Positive | 1426812 - 1428368 | 54921.3 |
| nucleoside abc transporter membrane protein | SAMN05421512_103338 | Not Available | Positive | 1428365 - 1429459 | 37103.9 |
| nucleoside abc transporter membrane protein | SAMN05421512_103339 | Not Available | Positive | 1429456 - 1430400 | 33095.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
