Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421512_103320 | Not Available | Negative | 1406303 - 1406527 | 8025.42 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05421512_103321 | Not Available | Negative | 1406562 - 1408205 | 60422.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421512_103322 | Not Available | Negative | 1408289 - 1409248 | 35188.7 |
| hypothetical protein | SAMN05421512_103323 | Not Available | Negative | 1409316 - 1409855 | 18924.2 |
| fumarylacetoacetate (faa) hydrolase | SAMN05421512_103324 | Not Available | Negative | 1409894 - 1410910 | 36144.0 |
| homogentisate 1,2-dioxygenase | SAMN05421512_103325 | Not Available | Negative | 1410914 - 1412239 | 49224.4 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_103326 | Not Available | Positive | 1412354 - 1412797 | 16620.9 |
| dna polymerase i | SAMN05421512_103327 | Not Available | Negative | 1412837 - 1415848 | 108291.0 |
| uncharacterized membrane protein ycft | SAMN05421512_103328 | Not Available | Negative | 1415911 - 1416972 | 39047.6 |
| upf0716 protein fxsa | SAMN05421512_103329 | Not Available | Negative | 1417078 - 1417605 | 18695.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
