Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05421512_103300 | Not Available | Positive | 1386678 - 1387730 | 38318.9 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_103301 | Not Available | Positive | 1387734 - 1388285 | 20121.9 |
| trap transporter, dctm subunit | SAMN05421512_103302 | Not Available | Positive | 1388282 - 1389646 | 48295.8 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN05421512_103303 | Not Available | Positive | 1389685 - 1390068 | 13145.9 |
| hypothetical protein | SAMN05421512_103304 | Not Available | Positive | 1390077 - 1390643 | 20580.8 |
| vanillate o-demethylase ferredoxin subunit | SAMN05421512_103305 | Not Available | Positive | 1390665 - 1391597 | 33477.1 |
| Trna-arg | Not Available | Not Available | Positive | 1391944 - 1392020 | Not Available |
| protein of unknown function | SAMN05421512_103307 | Not Available | Positive | 1392999 - 1394396 | 51223.9 |
| atpase, p-type (transporting), had superfamily, subfamily ic/heavy metal translocating p-type atpase | SAMN05421512_103308 | Not Available | Negative | 1394749 - 1396614 | 63518.5 |
| transcriptional regulator, copg family | SAMN05421512_103309 | Not Available | Positive | 1396821 - 1397351 | 19485.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
