Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator, iron response regulator | SAMN05421512_103290 | Not Available | Positive | 1373666 - 1374049 | 14205.9 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05421512_103291 | Not Available | Negative | 1374135 - 1374923 | 28698.9 |
| uncharacterized membrane protein | SAMN05421512_103292 | Not Available | Positive | 1374946 - 1375515 | 20687.0 |
| von hippel-lindau disease tumour suppressor protein | SAMN05421512_103293 | Not Available | Negative | 1375559 - 1377397 | 65197.7 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05421512_103294 | Not Available | Positive | 1377607 - 1378521 | 33381.2 |
| dna mismatch repair protein muts | SAMN05421512_103295 | Not Available | Negative | 1378529 - 1381339 | 100409.0 |
| allosteric nadp-dependent malic enzyme | SAMN05421512_103296 | Not Available | Positive | 1381512 - 1383794 | 82217.8 |
| phosphoribosylanthranilate isomerase | SAMN05421512_103297 | Not Available | Positive | 1383791 - 1384501 | 24442.4 |
| tryptophan synthase beta chain | SAMN05421512_103298 | Not Available | Positive | 1384498 - 1385712 | 43708.3 |
| transcriptional regulator, xre family with cupin sensor | SAMN05421512_103299 | Not Available | Negative | 1385795 - 1386373 | 21152.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
