Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_103280 | Not Available | Positive | 1364532 - 1365383 | 31252.7 |
| septum formation protein | SAMN05421512_103281 | Not Available | Positive | 1365424 - 1366020 | 21339.8 |
| shikimate dehydrogenase | SAMN05421512_103282 | Not Available | Positive | 1366017 - 1366856 | 29450.2 |
| dephospho-coa kinase | SAMN05421512_103283 | Not Available | Positive | 1366853 - 1367440 | 20742.3 |
| dna polymerase iii, epsilon subunit | SAMN05421512_103284 | Not Available | Positive | 1367618 - 1368322 | 25530.4 |
| glyoxylate reductase | SAMN05421512_103285 | Not Available | Negative | 1368378 - 1369364 | 36195.2 |
| sh3-like domain-containing protein | SAMN05421512_103286 | Not Available | Positive | 1369627 - 1370256 | 23200.8 |
| enoyl-[acyl-carrier-protein] reductase | SAMN05421512_103287 | Not Available | Negative | 1370363 - 1371199 | 29904.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase i | SAMN05421512_103288 | Not Available | Negative | 1371286 - 1372503 | 42874.9 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | SAMN05421512_103289 | Not Available | Negative | 1372691 - 1373251 | 20571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
