Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome segregation dna-binding protein | SAMN05421512_103270 | Not Available | Negative | 1352018 - 1352914 | 32636.1 |
| chromosome segregation atpase | SAMN05421512_103271 | Not Available | Negative | 1352967 - 1353794 | 29512.6 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN05421512_103272 | Not Available | Negative | 1353791 - 1354474 | 24727.5 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05421512_103273 | Not Available | Negative | 1354471 - 1356390 | 68728.4 |
| trna modification gtpase trme | SAMN05421512_103274 | Not Available | Negative | 1356634 - 1358028 | 49933.6 |
| hypothetical protein | SAMN05421512_103275 | Not Available | Positive | 1358119 - 1360212 | 75841.1 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421512_103276 | Not Available | Negative | 1360230 - 1360826 | 22550.7 |
| transcription termination factor rho | SAMN05421512_103277 | Not Available | Negative | 1360967 - 1362232 | 47373.1 |
| putative membrane protein | SAMN05421512_103278 | Not Available | Negative | 1362574 - 1362999 | 16114.3 |
| uroporphyrinogen decarboxylase | SAMN05421512_103279 | Not Available | Negative | 1363051 - 1364103 | 38246.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
