Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN05421512_103260 | Not Available | Negative | 1343411 - 1344736 | 46985.4 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05421512_103261 | Not Available | Negative | 1344865 - 1345476 | 22534.9 |
| membrane-associated enzyme, pap2 (acid phosphatase) superfamily | SAMN05421512_103262 | Not Available | Positive | 1345606 - 1346484 | 31709.2 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN05421512_103263 | Not Available | Positive | 1346755 - 1347438 | 24773.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421512_103264 | Not Available | Positive | 1347545 - 1348330 | 29603.4 |
| hypothetical protein | SAMN05421512_103265 | Not Available | Negative | 1348338 - 1348799 | 15525.2 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05421512_103266 | Not Available | Negative | 1348803 - 1350053 | 45481.8 |
| hypothetical protein | SAMN05421512_103267 | Not Available | Positive | 1350318 - 1350470 | 5341.48 |
| hypothetical protein | SAMN05421512_103268 | Not Available | Negative | 1350407 - 1350913 | 17947.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421512_103269 | Not Available | Positive | 1351308 - 1351919 | 23005.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
