Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdpmannose 4,6-dehydratase | SAMN05421512_103230 | Not Available | Positive | 1315379 - 1316458 | 40720.0 |
| gdp-l-fucose synthase | SAMN05421512_103231 | Not Available | Positive | 1316461 - 1317441 | 35823.6 |
| predicted sam-depedendent methyltransferase | SAMN05421512_103232 | Not Available | Positive | 1317438 - 1317986 | 20520.4 |
| carbonic anhydrase | SAMN05421512_103233 | Not Available | Negative | 1317995 - 1318708 | 26062.0 |
| l-erythro-3-methylmalyl-coa dehydratase | SAMN05421512_103234 | Not Available | Positive | 1318891 - 1319949 | 38626.5 |
| tyrosine recombinase xerd subunit | SAMN05421512_103235 | Not Available | Negative | 1319954 - 1320889 | 33966.5 |
| hypothetical protein | SAMN05421512_103236 | Not Available | Negative | 1320907 - 1321050 | 5144.5 |
| shikimate kinase | SAMN05421512_103237 | Not Available | Positive | 1321213 - 1321833 | 22310.0 |
| 3-dehydroquinate synthase | SAMN05421512_103238 | Not Available | Positive | 1321830 - 1322984 | 40813.9 |
| mg2+ and co2+ transporter corb, contains duf21, cbs pair, and corc-hlyc domains | SAMN05421512_103239 | Not Available | Positive | 1323043 - 1324398 | 48863.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
