Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pterin-4-alpha-carbinolamine dehydratase | SAMN05421512_103220 | Not Available | Negative | 1301744 - 1302037 | 10942.0 |
| protein tyrosine phosphatase | SAMN05421512_103221 | Not Available | Positive | 1302149 - 1302598 | 16004.0 |
| protein required for attachment to host cells | SAMN05421512_103222 | Not Available | Positive | 1302727 - 1303179 | 16834.8 |
| hypothetical protein | SAMN05421512_103223 | Not Available | Negative | 1303210 - 1304418 | 46657.6 |
| pyruvate carboxylase | SAMN05421512_103224 | Not Available | Negative | 1304426 - 1307893 | 126173.0 |
| atp-dependent rna helicase supv3l1/suv3 | SAMN05421512_103225 | Not Available | Positive | 1308716 - 1311829 | 112541.0 |
| heat shock protein hsp15 | SAMN05421512_103226 | Not Available | Positive | 1311868 - 1312356 | 17267.5 |
| ferredoxin | SAMN05421512_103227 | Not Available | Positive | 1312682 - 1313020 | 12544.7 |
| transcriptional regulator, card family | SAMN05421512_103228 | Not Available | Positive | 1313433 - 1314014 | 21409.5 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN05421512_103229 | Not Available | Positive | 1314355 - 1315224 | 32565.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
