Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Virion morphogenesis protein | SAMN05421512_1208 | Not Available | Negative | 4973326 - 4973805 | 17495.0 |
| Mu-like prophage protein gp36 | SAMN05421512_1209 | Not Available | Negative | 4973802 - 4974218 | 14564.0 |
| hypothetical protein | SAMN05421512_12010 | Not Available | Negative | 4974249 - 4974629 | 13186.2 |
| Mu-like prophage major head subunit gpt | SAMN05421512_12011 | Not Available | Negative | 4974696 - 4975595 | 34159.1 |
| Hypothetical protein | SAMN05421512_12012 | Not Available | Negative | 4975635 - 4976036 | 14090.7 |
| I protein | SAMN05421512_12013 | Not Available | Negative | 4976077 - 4977090 | 35856.3 |
| hypothetical protein | SAMN05421512_12014 | Not Available | Negative | 4977885 - 4978319 | 16618.8 |
| hypothetical protein | SAMN05421512_12015 | Not Available | Negative | 4978457 - 4978789 | 11440.7 |
| Virion morphogenesis protein | SAMN05421512_12016 | Not Available | Negative | 4979076 - 4980341 | 47526.6 |
| Hypothetical protein | SAMN05421512_12017 | Not Available | Negative | 4980331 - 4981920 | 57483.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
