Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-sialoglycoprotein endopeptidase | SAMN05421512_103180 | Not Available | Positive | 1264514 - 1265692 | 39944.9 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421512_103181 | Not Available | Positive | 1265689 - 1266213 | 19880.8 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05421512_103182 | Not Available | Positive | 1266210 - 1267229 | 33980.9 |
| hypothetical protein | SAMN05421512_103183 | Not Available | Positive | 1267343 - 1267630 | 10320.3 |
| predicted rna-binding protein, contains pua-like domain | SAMN05421512_103184 | Not Available | Positive | 1267634 - 1268056 | 16178.3 |
| predicted nicotinamide n-methyase | SAMN05421512_103185 | Not Available | Positive | 1268053 - 1268718 | 23832.4 |
| hippurate hydrolase | SAMN05421512_103186 | Not Available | Positive | 1268864 - 1270033 | 41683.8 |
| sulfite exporter taue/safe | SAMN05421512_103187 | Not Available | Positive | 1270153 - 1270890 | 25137.1 |
| l-threonine ammonia-lyase | SAMN05421512_103188 | Not Available | Positive | 1270929 - 1271888 | 32158.2 |
| 3-isopropylmalate dehydrogenase | SAMN05421512_103189 | Not Available | Positive | 1271983 - 1273095 | 39588.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
