Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding protein | SAMN05421512_103140 | Not Available | Positive | 1219312 - 1219821 | 18783.4 |
| peroxiredoxin, ohr subfamily | SAMN05421512_103141 | Not Available | Negative | 1219834 - 1220256 | 14333.0 |
| sulfoxide reductase heme-binding subunit yedz | SAMN05421512_103142 | Not Available | Negative | 1220431 - 1221339 | 32282.3 |
| 3-isopropylmalate dehydratase, small subunit | SAMN05421512_103143 | Not Available | Negative | 1222073 - 1222678 | 22077.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05421512_103144 | Not Available | Negative | 1222708 - 1223658 | 33156.7 |
| uncharacterized peroxidase-related enzyme | SAMN05421512_103145 | Not Available | Negative | 1223816 - 1224388 | 21142.3 |
| glutamate dehydrogenase (nad) | SAMN05421512_103146 | Not Available | Positive | 1224633 - 1229429 | 175890.0 |
| mfs transporter, umf1 family | SAMN05421512_103147 | Not Available | Positive | 1229426 - 1230901 | 50135.6 |
| gtp-binding protein | SAMN05421512_103148 | Not Available | Negative | 1230970 - 1232793 | 66566.1 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_103149 | Not Available | Positive | 1232963 - 1233475 | 18610.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
