Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit beta / citryl-coa lyase | SAMN05421512_103130 | Not Available | Positive | 1209637 - 1210530 | 31629.2 |
| hypothetical protein | SAMN05421512_103131 | Not Available | Positive | 1210557 - 1210763 | 7522.98 |
| hypothetical protein | SAMN05421512_103132 | Not Available | Positive | 1210848 - 1212098 | 44865.4 |
| intracellular septation protein | SAMN05421512_103133 | Not Available | Negative | 1212166 - 1212810 | 24033.7 |
| signal recognition particle-docking protein ftsy | SAMN05421512_103134 | Not Available | Negative | 1212810 - 1214246 | 50100.9 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN05421512_103135 | Not Available | Negative | 1214251 - 1215537 | 46867.5 |
| diaminopimelate epimerase | SAMN05421512_103136 | Not Available | Negative | 1215534 - 1216442 | 33115.3 |
| hypothetical protein | SAMN05421512_103137 | Not Available | Negative | 1216668 - 1217585 | 33606.8 |
| l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg family | SAMN05421512_103138 | Not Available | Negative | 1217739 - 1218311 | 20370.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421512_103139 | Not Available | Positive | 1218477 - 1219160 | 25436.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
