Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Site-specific dna-methyltransferase | SAMN05421512_11812 | Not Available | Positive | 4910831 - 4911538 | 26269.2 |
| Trna,type:ser,anti_codon:gct; | Not Available | Not Available | Positive | 4912248 - 4912337 | Not Available |
| Conserved hypothetical protein | SAMN05421512_11814 | Not Available | Positive | 4912695 - 4912985 | 10640.8 |
| Putative adsorbtion tail protein | SAMN05421512_1201 | Not Available | Negative | 4968584 - 4969643 | 36913.4 |
| phage tail protein (tail_p2_i) | SAMN05421512_1202 | Not Available | Negative | 4969651 - 4970784 | 39716.1 |
| Putative baseplate j-like protein | SAMN05421512_1203 | Not Available | Negative | 4970781 - 4971626 | 30180.3 |
| Putative phage tail protein | SAMN05421512_1204 | Not Available | Negative | 4971623 - 4972030 | 14809.6 |
| hypothetical protein | SAMN05421512_1205 | Not Available | Negative | 4972035 - 4972232 | 6948.3 |
| hypothetical protein | SAMN05421512_1206 | Not Available | Negative | 4972248 - 4972814 | 20126.0 |
| hypothetical protein | SAMN05421512_1207 | Not Available | Negative | 4972811 - 4973329 | 18646.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
