Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp:cob(i)alamin adenosyltransferase | SAMN05421512_103110 | Not Available | Negative | 1192856 - 1193431 | 20638.4 |
| hypoxia induced protein conserved region | SAMN05421512_103111 | Not Available | Negative | 1193471 - 1193668 | 7157.2 |
| short-chain dehydrogenase | SAMN05421512_103112 | Not Available | Negative | 1193715 - 1194593 | 32167.6 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN05421512_103113 | Not Available | Negative | 1194638 - 1195867 | 44547.8 |
| (3s)-malyl-coa thioesterase | SAMN05421512_103114 | Not Available | Positive | 1195987 - 1196862 | 32598.7 |
| gtpase, g3e family | SAMN05421512_103115 | Not Available | Negative | 1196863 - 1198083 | 43941.2 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05421512_103116 | Not Available | Negative | 1198129 - 1199523 | 48510.7 |
| urease accessory protein | SAMN05421512_103117 | Not Available | Positive | 1199883 - 1200731 | 30247.2 |
| urease subunit gamma/urease subunit gamma/beta | SAMN05421512_103118 | Not Available | Positive | 1200772 - 1201074 | 10909.5 |
| urease subunit beta | SAMN05421512_103119 | Not Available | Positive | 1201086 - 1201391 | 10958.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
