Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s16p | SAMN05421512_10390 | Not Available | Positive | 1174708 - 1175103 | 14317.2 |
| 16s rrna processing protein rimm | SAMN05421512_10391 | Not Available | Positive | 1175283 - 1175840 | 19981.4 |
| vanz like family protein | SAMN05421512_10392 | Not Available | Negative | 1175798 - 1176295 | 17656.6 |
| trna (guanine37-n(1)-) methyltransferase | SAMN05421512_10393 | Not Available | Positive | 1176402 - 1177097 | 25497.4 |
| lsu ribosomal protein l19p | SAMN05421512_10394 | Not Available | Positive | 1177378 - 1177842 | 17065.4 |
| cell division transport system permease protein | SAMN05421512_10395 | Not Available | Negative | 1177955 - 1179010 | 36525.6 |
| cell division transport system atp-binding protein | SAMN05421512_10396 | Not Available | Negative | 1179003 - 1179662 | 24675.4 |
| mj0042 family finger-like domain-containing protein | SAMN05421512_10397 | Not Available | Positive | 1179907 - 1180953 | 37709.4 |
| hypoxanthine phosphoribosyltransferase | SAMN05421512_10398 | Not Available | Positive | 1180950 - 1181492 | 19869.0 |
| response regulator receiver domain-containing protein | SAMN05421512_10399 | Not Available | Positive | 1181523 - 1181918 | 14271.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
