Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | SAMN05421512_10379 | Not Available | Negative | 1164137 - 1164574 | 15147.9 |
| exodeoxyribonuclease-3 | SAMN05421512_10380 | Not Available | Positive | 1164827 - 1165630 | 30080.8 |
| nadph2:quinone reductase | SAMN05421512_10381 | Not Available | Negative | 1165658 - 1166632 | 34834.1 |
| spou rrna methylase family protein | SAMN05421512_10382 | Not Available | Positive | 1166799 - 1167350 | 19809.1 |
| dna polymerase iii, delta subunit | SAMN05421512_10383 | Not Available | Negative | 1167378 - 1168418 | 37048.5 |
| lps-assembly lipoprotein | SAMN05421512_10384 | Not Available | Negative | 1168425 - 1169003 | 20716.6 |
| leucyl-trna synthetase | SAMN05421512_10385 | Not Available | Negative | 1168990 - 1171599 | 97659.9 |
| hypothetical protein | SAMN05421512_10386 | Not Available | Positive | 1171799 - 1172497 | 25003.7 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05421512_10388 | Not Available | Positive | 1172804 - 1174357 | 54621.6 |
| chorismate mutase | SAMN05421512_10389 | Not Available | Positive | 1174354 - 1174671 | 11870.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
