Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421512_10369 | Not Available | Positive | 1150612 - 1151835 | 42131.2 |
| anti-ecfsigma factor, chrr | SAMN05421512_10370 | Not Available | Positive | 1151875 - 1152555 | 24167.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421512_10371 | Not Available | Positive | 1152779 - 1154194 | 50526.0 |
| acetyltransferase involved in cellulose biosynthesis, celd/bcsl family | SAMN05421512_10372 | Not Available | Positive | 1154352 - 1155614 | 45624.5 |
| acetyl-coa synthetase | SAMN05421512_10373 | Not Available | Negative | 1155633 - 1157276 | 58823.2 |
| cysteine-rich secretory protein family protein | SAMN05421512_10374 | Not Available | Negative | 1157290 - 1157808 | 18257.0 |
| crotonyl-coa carboxylase/reductase | SAMN05421512_10375 | Not Available | Negative | 1158025 - 1159320 | 47830.8 |
| (r)-ethylmalonyl-coa mutase | SAMN05421512_10376 | Not Available | Positive | 1159796 - 1161832 | 72878.9 |
| hypothetical protein | SAMN05421512_10377 | Not Available | Positive | 1161969 - 1163189 | 44920.9 |
| lysozyme | SAMN05421512_10378 | Not Available | Negative | 1163260 - 1163979 | 28257.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
