Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN05421512_10358 | Not Available | Negative | 1139716 - 1141275 | 57444.6 |
| hypothetical protein | SAMN05421512_10359 | Not Available | Negative | 1141390 - 1142262 | 30247.3 |
| haloacid dehalogenase-like hydrolase | SAMN05421512_10361 | Not Available | Negative | 1142538 - 1143359 | 31272.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_10362 | Not Available | Negative | 1143519 - 1144700 | 42085.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421512_10363 | Not Available | Negative | 1144867 - 1146102 | 45148.2 |
| alpha/beta hydrolase fold | SAMN05421512_10364 | Not Available | Negative | 1146099 - 1147439 | 48603.7 |
| cupin domain-containing protein | SAMN05421512_10365 | Not Available | Negative | 1147607 - 1148047 | 15907.9 |
| transcriptional regulator, arac family | SAMN05421512_10366 | Not Available | Positive | 1148230 - 1149240 | 37380.8 |
| Trna-arg | Not Available | Not Available | Positive | 1149471 - 1149547 | Not Available |
| transcriptional regulator, lysr family | SAMN05421512_10368 | Not Available | Negative | 1149549 - 1150481 | 34478.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
