Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme, r subunit | SAMN05421512_10348 | Not Available | Positive | 1122546 - 1125968 | 127532.0 |
| type i restriction enzyme m protein | SAMN05421512_10349 | Not Available | Positive | 1126020 - 1127567 | 57553.4 |
| type i restriction enzyme, s subunit | SAMN05421512_10350 | Not Available | Positive | 1127564 - 1128937 | 51145.2 |
| hypothetical protein | SAMN05421512_10351 | Not Available | Positive | 1128955 - 1129977 | 37454.5 |
| diguanylate cyclase | SAMN05421512_10352 | Not Available | Positive | 1130038 - 1131216 | 41287.6 |
| hypothetical protein | SAMN05421512_10353 | Not Available | Negative | 1131213 - 1133867 | 97098.0 |
| carbamoyltransferase | SAMN05421512_10354 | Not Available | Negative | 1133885 - 1135573 | 60582.8 |
| phthiocerol/phenolphthiocerol synthesis type-i polyketide synthase b | SAMN05421512_10355 | Not Available | Negative | 1135573 - 1135824 | 9124.71 |
| cytochrome p450 | SAMN05421512_10356 | Not Available | Negative | 1135817 - 1138000 | 78920.3 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421512_10357 | Not Available | Negative | 1137997 - 1139691 | 59847.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
