Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nuclease (rnase h fold) | SAMN05421512_10338 | Not Available | Positive | 1113806 - 1114534 | 26363.1 |
| murein l,d-transpeptidase yafk | SAMN05421512_10339 | Not Available | Negative | 1114556 - 1115809 | 45085.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05421512_10340 | Not Available | Negative | 1116119 - 1117072 | 34083.8 |
| protein of unknown function | SAMN05421512_10341 | Not Available | Negative | 1117278 - 1118159 | 31205.9 |
| lsu ribosomal protein l28p | SAMN05421512_10342 | Not Available | Positive | 1118826 - 1119125 | 10844.2 |
| hypothetical protein | SAMN05421512_10343 | Not Available | Positive | 1119298 - 1119972 | 23776.4 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN05421512_10344 | Not Available | Negative | 1120482 - 1121378 | 30843.8 |
| hypothetical protein | SAMN05421512_10345 | Not Available | Negative | 1121419 - 1121769 | 11697.1 |
| yggt family protein | SAMN05421512_10346 | Not Available | Negative | 1121791 - 1122081 | 11047.1 |
| Trna-ala | Not Available | Not Available | Positive | 1122278 - 1122353 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
