Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_10328 | Not Available | Positive | 1103610 - 1104563 | 32964.7 |
| glutamyl-q trna(asp) synthetase | SAMN05421512_10329 | Not Available | Negative | 1104567 - 1105466 | 32786.3 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05421512_10330 | Not Available | Negative | 1105535 - 1106398 | 29607.4 |
| l,d-transpeptidase catalytic domain | SAMN05421512_10331 | Not Available | Positive | 1106655 - 1107128 | 17833.7 |
| nte family protein | SAMN05421512_10332 | Not Available | Negative | 1107602 - 1108618 | 37604.8 |
| 3-hydroxybutyrate dehydrogenase | SAMN05421512_10333 | Not Available | Negative | 1108712 - 1109494 | 27373.9 |
| hypothetical protein | SAMN05421512_10334 | Not Available | Negative | 1109675 - 1110427 | 26119.1 |
| hypothetical protein | SAMN05421512_10335 | Not Available | Negative | 1110529 - 1111443 | 32364.7 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05421512_10336 | Not Available | Positive | 1111637 - 1112905 | 44965.1 |
| pyridoxine kinase | SAMN05421512_10337 | Not Available | Positive | 1112902 - 1113786 | 31186.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
