Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Minor tail protein | SAMN05421512_1182 | Not Available | Positive | 4902132 - 4903274 | 39305.0 |
| Hypothetical protein | SAMN05421512_1183 | Not Available | Positive | 4903271 - 4903774 | 18609.0 |
| Contractile tail sheath protein | SAMN05421512_1184 | Not Available | Positive | 4903939 - 4905201 | 45128.4 |
| Putative tail protein | SAMN05421512_1185 | Not Available | Positive | 4905228 - 4905746 | 18651.5 |
| phage tail assembly chaperone protein, e, or 41 or 14 | SAMN05421512_1186 | Not Available | Positive | 4905779 - 4906198 | 14617.7 |
| hypothetical protein | SAMN05421512_1187 | Not Available | Positive | 4906198 - 4906323 | 4811.78 |
| Putative tail tape measure protein | SAMN05421512_1188 | Not Available | Positive | 4906336 - 4908813 | 86329.7 |
| Putative tail protein | SAMN05421512_1189 | Not Available | Positive | 4908814 - 4909245 | 15011.0 |
| Tail completion protein | SAMN05421512_11810 | Not Available | Positive | 4909242 - 4909502 | 9540.52 |
| Putative transcriptional regulator | SAMN05421512_11811 | Not Available | Positive | 4909502 - 4910497 | 35809.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
