Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase ii | SAMN05421512_1038 | Not Available | Positive | 1079664 - 1080326 | 23462.3 |
| uncharacterized membrane protein ykva, duf1232 family | SAMN05421512_1039 | Not Available | Negative | 1080327 - 1080734 | 14545.6 |
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | SAMN05421512_10310 | Not Available | Negative | 1080919 - 1082535 | 56024.1 |
| uncharacterized conserved protein, heparinase superfamily | SAMN05421512_10311 | Not Available | Negative | 1082676 - 1084433 | 64646.1 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05421512_10312 | Not Available | Negative | 1084587 - 1085993 | 50235.3 |
| heat shock protein. metallo peptidase. merops family m48b | SAMN05421512_10313 | Not Available | Negative | 1086160 - 1087200 | 36543.0 |
| hypothetical protein | SAMN05421512_10314 | Not Available | Positive | 1087351 - 1087596 | 9160.6 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05421512_10315 | Not Available | Positive | 1087810 - 1089042 | 43418.9 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05421512_10316 | Not Available | Positive | 1089046 - 1091871 | 101247.0 |
| outer membrane lipoprotein-sorting protein | SAMN05421512_10317 | Not Available | Positive | 1092006 - 1092650 | 23120.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
