Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched chain amino acid aminotransferase apoenzyme | SAMN05421512_102421 | Not Available | Negative | 1032950 - 1033807 | 31291.2 |
| 2-haloacid dehalogenase | SAMN05421512_102422 | Not Available | Positive | 1034178 - 1034858 | 25317.0 |
| protein of unknown function | SAMN05421512_102423 | Not Available | Negative | 1034962 - 1035369 | 15028.2 |
| hypothetical protein | SAMN05421512_102424 | Not Available | Negative | 1035441 - 1035842 | 13205.0 |
| hypothetical protein | SAMN05421512_102425 | Not Available | Positive | 1035938 - 1037545 | 58553.1 |
| right handed beta helix region | SAMN05421512_102426 | Not Available | Positive | 1037897 - 1040077 | 76871.1 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05421512_102427 | Not Available | Positive | 1040299 - 1041690 | 50362.8 |
| hypothetical protein | SAMN05421512_102428 | Not Available | Positive | 1041699 - 1042280 | 20839.2 |
| regulatory protein, luxr family | SAMN05421512_102429 | Not Available | Negative | 1042401 - 1043102 | 25268.4 |
| protein of unknown function | SAMN05421512_102430 | Not Available | Positive | 1043732 - 1044310 | 20516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
