Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) transport system permease protein | SAMN05421512_102391 | Not Available | Negative | 1003072 - 1004787 | 59601.9 |
| iron(iii) transport system substrate-binding protein | SAMN05421512_102392 | Not Available | Negative | 1004795 - 1005919 | 39902.9 |
| uncharacterized conserved protein, duf2336 family | SAMN05421512_102393 | Not Available | Negative | 1005909 - 1007120 | 42116.9 |
| hypothetical protein | SAMN05421512_102394 | Not Available | Positive | 1007408 - 1007632 | 8279.95 |
| hypothetical protein | SAMN05421512_102395 | Not Available | Positive | 1007589 - 1008575 | 37130.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05421512_102396 | Not Available | Positive | 1008717 - 1009769 | 37214.6 |
| transcriptional regulator, mucr family | SAMN05421512_102397 | Not Available | Negative | 1009912 - 1010328 | 15357.2 |
| multicomponent na+:h+ antiporter subunit g | SAMN05421512_102398 | Not Available | Negative | 1010668 - 1011003 | 11686.5 |
| multicomponent na+:h+ antiporter subunit f | SAMN05421512_102399 | Not Available | Negative | 1011000 - 1011362 | 12801.9 |
| multicomponent na+:h+ antiporter subunit e | SAMN05421512_102400 | Not Available | Negative | 1011359 - 1011835 | 17827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
