Stappia indica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia indica is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C. This microbe is characterized by its distinct morphological and physiological traits, which align with the broader characteristics typically attributed to the genus Stappia. As a Gram-negative organism, Stappia indica possesses a thin peptidoglycan layer surrounded by an outer membrane, which contributes to its structural integrity and influences its interactions with the environment. Given its optimal growth temperature, Stappia indica may be well-suited to mesophilic environments, potentially indicating a niche within temperate ecosystems where the ambient temperature fluctuates around this range. While specific ecological roles and interactions are not detailed, the thermal preference suggests that Stappia indica could play a role in nutrient cycling or organic matter degradation in habitats that experience moderate temperatures. Furthermore, the rod shape of Stappia indica may confer advantages in motility and surface adherence, which are essential traits for colonization and interaction with various substrates. This morphology may also facilitate the microbe's ability to thrive in diverse environments, potentially contributing to a dynamic ecological role within its habitat. Understanding the physiological and environmental preferences of Stappia indica can provide insights into its potential functional contributions to microbial communities and ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia indica strain USBA 352 genome assembly, contig:

Gene Summary

Adenine Count

825960 bp

Thymine Count

819759 bp

Guanine Count

1662501 bp

Cytosine Count

1703840 bp

Genome Length

5015470 bp

Protein-coding Genes

4471 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cubico group peptidase, beta-lactamase class c familySAMN05421512_102381Not AvailablePositive994125 - 99519538927.4
dnaa protein helix-turn-helixSAMN05421512_102382Not AvailablePositive995717 - 99619016461.9
hypothetical proteinSAMN05421512_102383Not AvailablePositive996194 - 99706630443.3
protein of unknown functionSAMN05421512_102384Not AvailableNegative997213 - 99776120506.8
cysteine desulfuration protein sufeSAMN05421512_102385Not AvailableNegative997891 - 99832215959.9
hypothetical proteinSAMN05421512_102386Not AvailableNegative998694 - 99917916720.9
two-component system, cell cycle sensor histidine kinase divjSAMN05421512_102387Not AvailablePositive999505 - 100135264142.9
peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing proteinSAMN05421512_102388Not AvailablePositive1001349 - 100228732345.7
hypothetical proteinSAMN05421512_102389Not AvailablePositive1002340 - 100268112894.2
hypothetical proteinSAMN05421512_102390Not AvailablePositive1002792 - 10030649311.03

Displaying genes 1001 – 1010 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial peritonitisCausesPMC8271035

Displaying health effects 1 – 1 of 1 in total